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Stuffed Shells Recipe (Three Cheese Filling)

A casserole of jumbo shells filled with ricotta, Parmesan, and mozzarella baked in tomato sauce to oozy, melty perfection will have everyone clamoring for a seat at the table. It’s supreme comfort food and it’s easy enough to put together for a satisfying weeknight meal. 

Classic Cheese-Stuffed Shells

It’s a weeknight and the hordes are hangry. That’s where these shells come in, baked with enough cheese and tomato to rival a big, fat pizza. But these shells are so much more rewarding! Seriously, who can resist a beautiful dish of golden, cheese-topped pasta in red sauce?  

Start by making the sauce, and while the sauce simmers, bring a pot of water to a boil and cook the shells. Meanwhile, make the filling. Then assemble and bake.

Simply Recipes / Sally Vargas


Make Homeade Sauce or Open a Jar

You can totally take 5 seconds of your valuable time to open a jar of your favorite store-bought sauce OR make my favorite homemade 10-minute tomato sauce (below). You’ll need a total of 2 1/2 to 3 cups of sauce, but more is always better if that’s what you like. You get to decide here!

A quick tomato sauce is easy to make but note that not all canned tomatoes are created equal. My favorite tomatoes to make a sauce with is whole San Marzanos, a variety of plum tomatoes, not a brand, grown in the San Marzano region of Italy. 

With so little effort, I find the homemade sauce brighter and fresher than the sauce in a jar, but there’s no shame in taking a shortcut here if you’d like.

Tips for Boiling Pasta Shells

  • Don’t skimp on the water in the pot; give the shells plenty of room to tumble around in the boiling water.
  • Check the directions on the package for the cooking time and then subtract 1-2 minutes.
  • Since the shells are going to bake again in the oven, you don’t want them to be too soft at the start.

Simply Recipes / Sally Vargas


Making a Three-Cheese Filling

Whole milk ricotta is sumptuous, but you can use skim milk ricotta if you are looking to shave off a few calories. I like Parmesan here, but if you would like a saltier, more pungent cheese you could use Pecorino Romano. As for the mozzarella, I encourage you to grate your own for the best melting qualities, since pre-grated mozz has anti-caking additives.

The ricotta, Parmesan, and mozzarella embellished by parsley, pepper, a delicious surprise of lemon, and a good handful of chopped parsley give this filling a lot of zest. Use a cookie scoop to fill the shells to make the job easier.

Make Ahead or Freeze Stuffed Shells

Assembled ahead of time and left unbaked, the shells will keep in the refrigerator, wrapped in plastic or foil, for up to 3 days. Add a few minutes of baking time if you are taking them straight from the fridge to the oven. 

To freeze, wrap the baking dish in foil and freeze for up to 3 months. Defrost in the fridge overnight and bake according to directions or bake directly from freezer to oven for 50 to 60 minutes.

Simply Recipes / Sally Vargas


Pasta Me Please!

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